Open Science #

Relevant Resources #

The following resources are made available in support of current projects further detailed on this website. This list does not detail resources otherwise reposited on DANDI or other services like IPFS or Zenodo (as are leveraged by Gentoo Scinence). They can be downloaded manually from here, or — if using Gentoo Linux — via the respective ebuilds from the Chymeric Overlay.

Brain Templates #

• Mouse:
  • mouse-brain-templates-0.5.3 [SHA512], mouse-brain-templatesHD-0.5.3 [SHA512]
• Rat:
  • rat-brain-templates-0.2 [SHA512]
  • AWRA and MARPN sources, as used by the rat brain templates generator:
    • awra_marpn_rat_brains-1.0 [SHA512]

Serotonin Profiling #

• BIDS Data (DRLFOM):
  • drlfom_bidsdata-1.1.1 [SHA512]
• Bruker ParaVision Data (IRSABI):
  • irsabi_brudata-1.4.1 [SHA512]

Calcium Responses #

• BIDS Data (ZTAU):
  • ztau_bidsdata-1.0 [SHA512]
  • ztau_bidsdata-1.1 [SHA512]
• BIDS Data (NVCZ):
  • nvcz_data-0.2.tar.xz [SHA512]
• Preprocessed BIDS Data (NVCZ):
  • nvcz_preprocessed-1.0.0.tar.xz [SHA512]

Dopamine Mapping #

• BIDS Data (OPFVTA):
  • opfvta_bidsdata-2.1 [SHA512]
• Bruker ParaVision Data:
  • opfvta_brudata-2.0 [SHA512]

Structural Brain Mapping #

• ABI Connectivity Maps:
  • ABI-connectivity-data-0.1 [SHA512]
  • ABI-connectivity-data-0.2 [SHA512]
• ABI Gene Expression Maps:
  • ABI-expression-data-0.2 [SHA512]

Software Testdata #

• ANTs
  • ants_testdata-2.3.4 [SHA512]
• SAMRI
  • samri_bidsdata-0.3 [SHA512]
  • samri_bindata-0.4 [SHA512]